Improving and humanizing animal models by microbiomic techniques

Published on June 30, 2026   28 min

A selection of talks on Physiology & Anatomy

Please wait while the transcript is being prepared...
0:00
My name is Axel Kornerup Hansen, and I will introduce you to how important the microbiome is for the modeling of human diseases in animals, especially in mice.
0:12
I worked with animal models and bacteria for almost 40 years. Today, I'm a professor in laboratory animal science and welfare at the vet school of the University of Copenhagen. Through this work, I have had several collaborations with commercial enterprises, which, of course, can give some conflicts of interest.
0:31
Laboratory rodents are normally produced as specific pathogen-free, SPF. That means that they are housed and produced under ultra-hygienic conditions, rendering them free of pathogens. But unfortunately, also have a range of microorganisms which may be essential for the modeling of human diseases.
0:56
A main issue with rodent disease models has over the last decades been that they very frequently are difficult to reproduce. That means, to get the same results in new but similar studies. Also, often rodent studies translate poorly into humans. That means much preclinical research fails when data from rodents are used to set up clinical studies in humans. This is known as a reproducibility crisis.
1:27
One explanation for this lack of reproducibility may be that we fail to consider that we buy other stuff when we buy a mouse.
1:39
When the laboratory mouse is delivered from a commercial breeder, you will, in addition to the mouse, with its approximately 20000 number of genes, also get maybe 1000 different microbes, which in numbers may be 10^14, and which contain maybe two million microbial genes. That means the microbes have a much higher capacity than the mammal host itself, and much of what the mouse can do is actually done by the microbes. The bacteriome consists of more or less the same bacterial phyla as in humans. Deferribacteres accepted because this is normally part of a starting culture when starting up new rodent colonies. However, the abundances may differ essentially between mice and humans. In addition to the bacteriome, we also have the virome, the mycobiome, and the parasitome. Many of these are commensals or symbionts. But within all groups, there are also pathogens. Although these are unwanted because disease is unwanted in our laboratory animals, pathogens may also be important for the induction of certain rodent models for human diseases.

Quiz available with full talk access. Request Free Trial or Login.

Hide

Improving and humanizing animal models by microbiomic techniques

Embed in course/own notes