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Printable Handouts
Navigable Slide Index
- Introduction
- Dorsal nuclear gradient
- Multiplex detection of dorsal target genes
- Dorsal, Twist and Snail in the DV network
- Summary of ChIP-chip assays
- ChIP-chip assays identify dorsal target enhancers
- Organized binding sites in dorsal target enhancers
- Enhancer structure is important for function
- Enhanceosome structure
- Type 2 enhancers as transistors
- Gene activation via Pol II recruitment or elongation
- Dorsal thresholds on tiling arrays
- Ectopic Snail in 10B mutants
- Stalled Pol II at repressed loci
- Uniform Pol II at active loci
- No Pol II at silent loci
- Pol II stalled at repressed gene
- Pol II pausing creates stable transcription bubble
- Defined pausing site in Rhomboid gene
- Pol II released when Snail repressor is absent
- Whole-genome Pol II profiles
- 1000 stalled loci in early embryo
- Stalled loci I: stress genes
- Stalled loci II: developmental control genes
- Acknowledgements
Topics Covered
- The dorsal-ventral patterning of the early Drosophila embryo is controlled by a sequence-specific transcription factor called Dorsal, which is related to mammalian NF-κB
- The Dorsal protein is distributed in a broad nuclear gradient, which generates different thresholds of gene activity
- The mechanisms underlying these thresholds are likely to be relevant to a host of developmental processes in metazoan embryos
Talk Citation
Levine, M. (2018, May 31). Dorsal-ventral patterning of the Drosophila embryo [Video file]. In The Biomedical & Life Sciences Collection, Henry Stewart Talks. Retrieved November 23, 2024, from https://doi.org/10.69645/NWOG3954.Export Citation (RIS)
Publication History
Financial Disclosures
- Prof. Mike Levine has not informed HSTalks of any commercial/financial relationship that it is appropriate to disclose.
A selection of talks on Reproduction & Development
Transcript
Please wait while the transcript is being prepared...
0:00
I'm Mike Levine at UC Berkeley and
I'm going to discuss the dorsal-ventral
patterning of the Drosophila embryo.
This process is controlled by
a sequence-specific transcription factor
called 'dorsal' (dl),
which is shown on the next slide.
0:15
This is a side view of
a 2-hour Drosophila embryo,
stained with an antibody
against the dorsal protein.
Initially the protein is
distributed uniformly
throughout the cytoplasm of the egg and
early embryo,
but shortly after fertilization
the protein begins to enter nuclei.
Here you can see that in ventral
regions (bottom regions) the protein
has entered nuclei, but in the top
(or dorsal) regions of the embryo,
the dorsal protein
remains in the cytoplasm.
So regulated nuclear transport produces
a broad dorsal nuclear gradient with
peak levels present in ventral regions,
progressively lower levels in lateral and
more dorsal regions.
This dorsal nuclear gradient controls
dorsal-ventral patterning by regulating
something like 60 to 70
different target genes,
in a concentration-dependent fashion.
The next slide shows several
examples of dorsal target genes,
which reveal distinct threshold
readouts of the dorsal gradient.
1:18
High levels of the dorsal gradient
activate the genes stained in yellow,
lower levels of the gradient activate
the transcripts encoded by the genes
visualized in blue, green and red.
Altogether the dorsal gradient establishes
several basic embryonic tissues,
high levels of the gradient establish
the mesoderm at the bottom of
the embryo as visualized by
the marker gene seen in yellow,
low levels of the gradient establish
the presumptive neurogenic ectoderm in
lateral regions as seen in the expression
of these genes in blue, green and red, and
finally the absence of the dorsal gradient
permits the expression of genes in
the very top of the embryo, not shown
here, which will form the dorsal ectoderm.
The dorsal gradient does not produce these
different thresholds of gene activity
alone, instead it works in concert
with two other sequence-specific
transcription factors,
shown on the next slide.