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Printable Handouts
Navigable Slide Index
- Introduction
- What is a microRNA (miRNA)?
- What do miRNAs do?
- Function of animal microRNAs
- Drosha and Dicer
- Argonaute proteins
- DGCR8 and R2D2
- DEAD-box helicases
- Action of miRNA and siRNA
- miRNA vs. siRNA
- Stats of miRNA (as of Nov. 2005)
- How to find a new miRNA?
- Genomic location and gene structure
- Gene structure and transcription
- MicroRNA maturation in animals
- Nuclear processing (cropping) of pri-miRNA
- Nuclear processing (cropping) by Drosha
- The action of Microprocessor
- Nuclear export by exportin 5 (Exp5)
- Exportin 5 recognition motif
- Cytoplasmic processing (dicing) by Dicer
- Partnership of RNase III and dsRBP proteins
- Cleavage site selection by Dicer
- RNase III type proteins - mechanism of action
- Classes of Rnase III type proteins
- Pre-miRNA processing
- Coordinated events in miRNA maturation
- Strand selection
- miRISC assembly
- Regulation of miRNA expression
- How to determine miRNA levels in cells?
- miRNA expression profiling (1)
- miRNA expression profiling (2)
- miRNA biogenesis in plants
- Generation of shRNAs
Topics Covered
- Definition of microRNA
- Comparison to small interfering RNA
- Mechanism of gene silencing
- Factors in the microRNA pathway
- RNase III proteins and their interacting proteins
- MicroRNA gene structure and transcription
- Drosha and primary microRNA processing
- Exportin 5 and pre-microRNA export
- Dicer and pre-microRNA processing
- RISC assembly and strand selection
- MicroRNA biogenesis in plants
- Experimental tools to investigate microRNA
Talk Citation
Kim, N. (2016, October 13). MicroRNA biogenesis [Video file]. In The Biomedical & Life Sciences Collection, Henry Stewart Talks. Retrieved November 23, 2024, from https://doi.org/10.69645/SFBG5715.Export Citation (RIS)
Publication History
Financial Disclosures
- Dr. Narry Kim has not informed HSTalks of any commercial/financial relationship that it is appropriate to disclose.
MicroRNA biogenesis
A selection of talks on Cell Biology
Transcript
Please wait while the transcript is being prepared...
0:00
MicroRNAs are key regulators in diverse cellular pathways of
eukaryotes from cell differentiation to open development.
This presentation will explain what is known about these interesting molecules with
an emphasis on the gene structure, transcription, and processing.
0:24
Let me begin with the definition of microRNAs.
MicroRNA, miRNA for short is defined as
a single-stranded RNA of approximately 22 nucleotides in length,
which is generated by the RNAse III type enzyme from
an endogenous transcript that contains a local hairpin structure.
Shown here as examples are let-7 RNAs from C. elegans, Drosophila and human.
Highlighted in red is the mature let-7 RNA that is
processed out of one arm of the hairpin shaped precursor.
Like let-7 RNA, a number of microRNAs are conserved phylogenetically.
The degree of conservation is highest in
the mature microRNA segments but gets lower
in the terminal loop and in the base pair segments.
The length of the hairpin is approximately 85 nucleotides in animals.
But in plants, the structure and the length of the precursor is more variable.
1:27
So, what are the functions of microRNAs?
MicroRNAs act as guide molecules in post-transcriptional gene silencing.
Silencing is achieved by specific base pairing with the target messenger RNA.
When microRNAs pair only partially with the target mRNA,
they block translation of the mRNA into protein and eventually lead to mRNA decay.
When microRNAs pair with the targets perfectly,
meaning that the complementarity between
the messenger RNA and the microRNA is high enough,
the binding leads to mRNA cleavage in the middle of the binding site.
Mostly, animal microRNAs act through the former mechanism to repress translation,
whereas most plant microRNAs employed
the latter mechanism to induce endonucleolytic mRNA cleavage.
Recent reports indicated that each microRNA directly regulates hundreds of target mRNAs,
sometimes in combination with other microRNAs.
In humans, over 30 percent of protein coding
genes are believed to be regulated directly by microRNAs.
By silencing various target mRNAs,
microRNAs play key roles in
diverse regulatory pathways including many different aspects of embryonic development,
the differentiation of various cell types,
apoptosis and proliferation, hormone secretion,
and stem cell maintenance.
Importantly, the connection to tumorigenesis is becoming more apparent.