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- Introduction and General Properties of Plasmids
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1. Introduction to plasmid biology
- Prof. Emeritus Don Clewell
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2. General properties and applications of plasmids
- Prof. Emeritus Don Clewell
- Replication
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3. Plasmids: copy number control by antisense RNAs
- Prof. Gerhart Wagner
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4. Plasmid rolling-circle (RC) replication
- Prof. Saleem Khan
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5. Replication of linear plasmids in bacteria
- Prof. George Chaconas
- Maintenance and Partitioning
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6. Plasmid segregation and stability in bacteria
- Prof. Barbara Funnell
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7. Plasmid stabilization by cell killing
- Prof. Keith Weaver
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8. Dimer catastrophes and plasmid resolution
- Dr. David Summers
- Conjugation and Mobilization
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9. The diversity of bacterial conjugation and mobilization systems
- Prof. Fernando de la Cruz
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11. DNA processing in conjugative transfer
- Dr. Joel Schildbach
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12. Agrobacterium tumefaciens
- Dr. Stephen Winans
- Genetic Traits Frequently Associated with Plasmids
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13. Insertion sequences and DNA transposition
- Prof. William Reznikoff
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14. Plasmids, integrons and the spread of antibiotic resistance
- Prof. Hatch Stokes
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15. Virulence plasmids
- Prof. Julian Rood
- Eukaryotic Plasmids
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16. The yeast plasmid: a highly persistent selfish DNA element
- Prof. Makkuni Jayaram
- Population Biology and Evolution
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17. Evolution of plasmids and their role in bacterial diversity and adaptability
- Prof. Christopher Thomas
- Archived Lectures *These may not cover the latest advances in the field
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19. Plasmid segregation and stability in bacteria
- Prof. Barbara Funnell
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20. Replication of linear plasmids in bacteria
- Prof. George Chaconas
Printable Handouts
Navigable Slide Index
- Introduction
- Processes contribute to plasmid stability in bacteria
- What plasmids need partition systems?
- Plasmid partition systems are positioning systems
- Most plasmid partition systems exist as tripartite cassettes (1)
- Most plasmid partition systems exist as tripartite cassettes (2)
- Classes based on NTPase homology (1)
- Centromere-binding proteins fall into two structure groups
- Centromere sites contain repeated sequence motifs
- Par operons are typically autoregulated
- Questions (2008)
- Mechanisms of plasmid partition
- RHH2 centromere-binding proteins
- HTH2 centromere-binding proteins
- ParB forms large partition complexes at parS
- ParBs possess a common domain arrangement
- ParB binds CTP
- ParB is a CTP and parS-dependent clamp
- Positioning of the partition complex
- Classes based on NTPase homology (2)
- Type 1, 2 and 3 partition systems (1)
- ParM filaments drive plasmids apart
- Types 2 & 3 systems work by dynamic filamentation
- Type 1, 2 and 3 partition systems (2)
- Plasmid/par complexes localization requires ParA
- ParA has non-specific DNA binding activity
- ParA shows dynamic localization across the bacterial nucleoid
- Type 1 partition works via a Brownian ratchet mechanism
- Plasmid partition is a transport reaction
- ParA-like cargo systems
- Questions
Topics Covered
- Role of plasmids
- Segregation, or partition, systems of bacterial plasmids
- How this contributes to plasmid stability
- What is partition?
- The action of plasmid-encoded proteins
- Plasmid system classification
- Molecular mechanisms
- RHH2 centromere-binding proteins
- HTH2 centromere-binding proteins
- Brownian ratchet mechanism
Links
Series:
Categories:
Talk Citation
Funnell, B. (2024, January 31). Plasmid segregation and stability in bacteria [Video file]. In The Biomedical & Life Sciences Collection, Henry Stewart Talks. Retrieved December 26, 2024, from https://doi.org/10.69645/AXAQ4016.Export Citation (RIS)
Publication History
Financial Disclosures
- There are no commercial/financial matters to disclose.
A selection of talks on Genetics & Epigenetics
Transcript
Please wait while the transcript is being prepared...
0:00
My name is Barbara
Funnell and I am from
the Department of
Molecular Genetics
at the University of Toronto.
My research interests are
chromosome dynamics in bacteria
and specifically
the mechanisms of
segregation of
bacterial plasmids.
In this talk, I will
discuss plasmid segregation
or as it is more
commonly called in
bacteria partition
or partitioning.
First, I will
introduce and review
general characteristics of
plasmid partition systems and
then I will discuss,
in more detail
the mechanisms of these
events in bacteria.
My research concerns the
partition of a plasmid called
P1 in the bacteria
Escherichia coli.
I will use examples from work on
several different plasmids
including P1 during this talk.
This talk is an update from
a previous version
published in 2008
and there have been
significant developments
in the partition
field since then.
Particularly, in the structural
biology, biochemistry,
and mechanistic models,
and in the variety of
partition systems that have been
identified in
bacterial plasmids.
0:60
Plasmids as autonomous
extrachromosomal elements must
ensure their own replication and
stable maintenance in
bacterial populations,
and they use several
different types of processes.
Without them, plasmids
are lost from
the population of bacterial
cells and are thus unstable.
First, plasmid
replication systems
control copy number
to make sure that
every cell has enough
plasmid copies to
segregate to daughter cells
at the next cell division.
Second, plasmids occasionally
recombine with each
other via homologous
recombination
to produce higher multimers,
that is dimers or higher,
which reduces the number
of partitionable units.
So, plasmids often contain
specific recombination systems
to resolve these
back into monomers.
Perhaps the most
famous of these is
the lox-cre recombinase
pair from the P1 plasmid,
which has been exploited very
successfully for
genetic engineering.
Third, plasmids in code,
what are often called
addiction systems,
these consist of
a bacterial toxin
and antitoxin which kill
cells that lose the
plasmid because
the antitoxin is less
stable than the toxin.
Fourth, and the subject of
this talk, the partition
systems which make sure that
enough plasmids are
in the right place in
the cell so that
every daughter cell
receives at least one copy.
That is, the partition is
a transport and
positioning process
where the cargo is plasmid DNA.