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1. Introduction
2. Talk overview
3. European open science cloud
4. Making efficient use of data for metabolomics
5. Metabolomics standard initiative (history)
6. Data sharing repositories
7. MetabolomeXchange.org: Mx based on Px
8. ISA-tab format capturing meta-data MI
9. The ISAcreator: an editor for ISA-tab format
10. Metadata configuration: CIMR templates (MSI)
11. MetaboLights: study validation status
12. MetaboLights: study validation
13. OmicsDI: collection of omics
14. OmicsDI
15. Leading to data discovery
16. MSI data/metadata standards activities
17. Metabolite annotation/identification
18. mzTab: capturing metabolomics identification
19. Overview of data exchange standards
20. NMR data exchange standards
21. nmrML support
22. qcML: capturing quality control
23. Generating ISA-tab metadata files
24. Journals support data-sharing and reuse
25. Summary
26. The ISA team
27. COSMOS acknowledgments
28. Funding and collaborators

Topics Covered

• Current state of data sharing and exchange standards
• Making efficient use of data for metabolomics
• Metabolomics standard initiative
• Data sharing repositories
• Metabolite annotation/identification
• Capturing metadata
• Metabolomics identification
• Quality control in metabolomics
• Journals for metabolomics data-sharing and reuse

Links

Series:

• Bioinformatics for Metabolomics

Categories:

• Biochemistry
• Cell Biology
• Metabolism & Nutrition
• Methods
• Omics & Systems Biology

Therapeutic Areas:

• Cardiovascular & Metabolic

Talk Citation

Salek, R. (2018, May 31). Data sharing and data standards for metabolomics: where are we now? [Video file]. In The Biomedical & Life Sciences Collection, Henry Stewart Talks. Retrieved August 17, 2018, from https://hstalks.com/bs/3730/.

Talk Information

• Published on May 31, 2018