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- Overview of Molecular Chaperones
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1. History of the molecular chaperone concept: roles in assembly processes
- Prof. Emeritus R. John Ellis
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2. Chaperone mechanisms in cellular protein folding
- Prof. Dr. F. Ulrich Hartl
- Prokaryotic Molecular Chaperones
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3. Mechanistic aspects of chaperonin GroEL/ES function
- Prof. Amnon Horovitz
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4. Structure and function of the ATP-dependent Clp chaperone/protease machines
- Dr. Michael R. Maurizi
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5. The role of chaperones and Sec machinery in protein secretion
- Prof. Koreaki Ito
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6. How can molecular chaperones repair damaged protein structures?
- Prof. Pierre Goloubinoff
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7. Disulfide bond formation in vivo
- Prof. James Bardwell
- Eukaryotic Molecular Chaperones
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8. Overview of eukaryotic molecular chaperones in the cytosol
- Dr. Jason C. Young
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9. Chaperonin-containing TCP-1 (CCT), actin springs, and protein folding fluxes
- Prof. Keith Willison
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10. The functions of the Hsp70 system
- Prof. Jeffrey L. Brodsky
- Role of Chaperones in Diseases
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12. The roles of molecular chaperones in bacterial infection
- Prof. Tomoko Yamamoto
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13. Role of chaperonin-like proteins in Bardet-Biedl syndrome
- Dr. Michel R. Leroux
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14. Roles for molecular chaperones in cystic fibrosis
- Prof. Douglas M. Cyr
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15. Targeting cancer: designing drugs against Hsp90
- Dr. Gabriela Chiosis
- Archived Lectures *These may not cover the latest advances in the field
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16. Overview of prokaryotic molecular chaperones
- Prof. Walid A. Houry
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17. The biogenesis of E. coli inner membrane proteins
- Dr. Joen Luirink
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18. Mechanism of chaperone action of small heat shock proteins
- Prof. Elizabeth Vierling
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19. ClpB: a chaperone for protein disaggregation
- Prof. Michal Zolkiewski
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20. The roles of chaperonins in bacteria
- Dr. Peter Lund
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21. Towards a unifying mechanism for the Hsp70 chaperones
- Prof. Pierre Goloubinoff
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23. Hsp31: a general stress protein of Escherichia coli
- Prof. Francois Baneyx
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24. Hsp104: a specialized chaperone for protein disaggregation
- Dr. John R. Glover
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26. The role of chaperones in Parkinson's disease
- Dr. Konstanze F. Winklhofer
Printable Handouts
Navigable Slide Index
- Introduction
- Intracellular protein degradation
- Multi-component degradation systems
- Talk outline
- Components of Clp proteases
- Structure of ClpP
- ClpP tetradecamer
- Clp/Hsp100 chaperones
- ClpA belongs to the AAA+ superfamily
- Stacked ringed structure of Clp proteases
- E. coli proteins degraded by ClpXP and ClpAP
- Regulated degradation of the sigma factor RpoS
- Degradation of SsrA tagged proteins by ClpXP
- Substrates are recognized by sequence motifs
- Motifs recognized by ClpX
- Motifs recognized by ClpA
- N- and C-terminal degrons are transferable
- Protein degradation requires ATP hydrolysis
- Protein remodeling activity of Clp chaperones
- ClpX catalyzes unfolding of GFP-SsrA
- Axial pathway for substrates into ClpP
- One substrate binding site per hexamer
- Steps in ATP-dependent protein degradation
- Kinetics of ATP-dependent degradation
- ClpAP is stable for multiple rounds of degradation
- Peptide bond cleavage by ClpAP and ClpXP is fast
- ATP hydrolysis rates are variable
- ATP is used for unfolding and translocation
- ATP consumed faster during rapid degradation
- Partitioning of ATP use
- Variable amounts of ATP used for unfolding
- Kinetics of ClpXP protein unfolding and degradation
- ATP cost for translocation by ClpA and ClpX
- N-domains help and hinder protein degradation
- Remaining questions
- Structural basis of function and mechanism
- Crystal structure of ClpA subunit
- Model of ClpA hexamer
- Sectional view of ClpA hexamer model
- Both AAA+ domains of ClpA are functional
- Model of ClpX hexamer
- Loop in ClpX interacts on edge of ClpP
- The asymmetric interaction of ClpA/X and ClpP
- All six ClpP loops are needed to form ClpXP
- N-terminal axial loops of ClpP
- Consensus sequence of ClpP N-terminal axial loop
- Activities of human ClpP N-terminal mutants
- Mobile loops in the axial channels of ClpA
- Low activity of D1 and D2 channel loop mutants
- Mobile loops in the axial channel of ClpX
- Degradation activity of ClpX channel loop mutants
- How does ATP hydrolysis promote activity?
- ATP binding and release produces a rotation
- Movement of the channel loops in response to ATP
- ClpX subunits act as individual motors
- Random versus coupled activity of ClpX subunits
- Bipartite mode of substrate interaction
- Enhanced substrate interaction with adaptors
- Adaptors: modulators of substrate binding
- Anchoring of SspB to ClpX-ZBD
- SsrA binds in deep groove in SspB
- Inactive ClpP traps translocated substrates
- 2D gel separation of trapped substrates
- ClpX substrates trapped by ClpP-SA
- Degradation of GFP-SsrA by ClpAP and ClpXP
- Pull-down of SsrA-tagged proteins with ClpXP
- Degradation of N-end rule proteins by ClpAP
- Crystal structure of ClpS bound to ClpA-N-domain
- Mobile N-domains of ClpA
- N-domains help binding of unfolded proteins
- Many remaining questions
- Potential substrate channels between ClpP rings
- Dysregulation of ClpP makes it lethal
- Contributors
Topics Covered
- The Clp/Hsp100 family
- Structure of Clp complexes
- Unfolding and degradation activities of Clps
- Substrate recognition and the role of adaptors
- ATP utilization, unfolding and translocation
- Dynamics of Clp complexes
- Protein quality control and the in vivo functions of Clp chaperone/proteases
Talk Citation
Maurizi, M.R. (2007, October 1). Structure and function of the ATP-dependent Clp chaperone/protease machines [Video file]. In The Biomedical & Life Sciences Collection, Henry Stewart Talks. Retrieved April 1, 2025, from https://doi.org/10.69645/INAP3788.Export Citation (RIS)
Publication History
- Published on October 1, 2007
Financial Disclosures
- Dr. Michael R. Maurizi has not informed HSTalks of any commercial/financial relationship that it is appropriate to disclose.
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