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Printable Handouts
Navigable Slide Index
- Introduction
- Age incidence curve for colorectal cancer
- Clonal evolution in tumourigenesis
- Familial polyposis coli
- Family history of case 1
- Mutation - selection balance: dominant
- Mutation - selection balance: recessive
- Mutation - selection balance: dominant, recessive
- Applying the results to the data for FAP
- Positional cloning
- Two FAP families with APC mutation segregation
- Revealing recessive mutations
- APC mutations
- Mutations in different cell lines
- The consequences of different mutations
- The second type of inherited colorectal cancer
- Initial steps in human DNA mismatch repair
- Germline MMR mutations in 332 HNPCC families
- Cancer risks in HNPCC
- The Wnt pathway
- The p53 gene
- Mutated genes in CRC
- Different stages in colorectal cancer development
- Requirement for instability in cancers - pros
- Requirement for instability in cancers - cons
- Chromosomal stability in colorectal adenomas
- CpG island hypermethylation
- Genes expression control changes by methylation
- Crypt scheme and model for crypt turnover
- Genetic changes alter growth properties
- Mendelian inherited colorectal cancer syndromes
- A recessive form of polyposis
- Clinicla features of Finnish CRC patients
- Types of colorectal cancers in Finnish patients
- Inherited susceptibility and sporadic CRC
- HLA types
- Role of HLA types in autoimmune diseases
- Phenotypes - linkage disequilibrium
- Rate of decline of pairwise linkage disequilibrium
- A plot of linkage disequilibrium decline rate
- Principle of SNP association analysis
- I1307K and E1317Q APC mutations
- E1317Q APC missense variant
- Dominant gene 50% penetrance
- Multifactorial genetic susceptibility
- Selection of patients with adenomatous polyps
- Mutational analysis of hMLH1 and hMSH2 genes
- hMLH1 polymorphisms
- Summary of variants found in germline samples
- Summary of rare variants
Topics Covered
- Cancer: a somatic evolutionary process
- Colorectal cancer: a good model to study
- Two clear cut familial forms: FAP and HNPCC
- Mutation selection balance for dominants and recessives: application to FAP
- APC gene found by positional cloning
- Loss of heterozygosity proved its role in sporadic cancers
- Selection for mutations in the APC "mutation cluster region"
- HNPCC mismatch repair genes found by candidate guess
- Mutated genes in colorectal cancer include p53 and wnt pathway, occur in adenoma to carcinoma sequence
- Arguments for and against need for genomic instability in cancers
- Epigenetic changes
- Mathematical model of normal and cancerous crypt
- Types of familial cancers: mostly rarer than FAP and HNPCC
- Approaches to studying multifactorial inherited susceptibility
- HLA and disease: the model
- Role of linkage disequilibrium
- Principles of SNP association analysis
- Rare missense variants in the APC gene confer susceptibility
- The "rare variant hypothesis" for multifactorial inherited susceptibility: exemplified by study of colorectal adenomas
- Update interview: New immune therapy treatments
- Update interview: Check point blockers for mismatch repair defective cancers
- Update interview: Development of T cell attracting bispecific antibodies targeting CEA(CEACAM5)
- Update interview: Mutations found in CRC and different spectrum between mismatch repair defective versus non defective CRCs
- Update interview: MYH associated polyposis
- Update interview: Dominant mutations inPolymerases D and E
- Update interview: 40Kb deletion in gremlin leading to Hereditary Mixed Polyposis Syndrome
- Update interview: Low effect genetic variants found by Genome Wide Association studies
- Update interview: More studies needed on driver gene changes due to methylation
- Update interview: Need better understanding of the control of differentiation in CRCs
Links
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Talk Citation
Bodmer, W. (2020, May 15). Colorectal cancer and the rare variant hypothesis [Video file]. In The Biomedical & Life Sciences Collection, Henry Stewart Talks. Retrieved November 21, 2024, from https://doi.org/10.69645/NYAA1525.Export Citation (RIS)
Publication History
Financial Disclosures
- Prof. Sir Walter Bodmer has not informed HSTalks of any commercial/financial relationship that it is appropriate to disclose.
Update Available
The speaker addresses developments since the publication of the original talk. We recommend listening to the associated update as well as the lecture.
- Full lecture Duration: 52:57 min
- Update Interview Duration: 17:26 min
A selection of talks on Cancer
Transcript
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0:00
This talk is about "Colorectal Cancer and
the Rare Variant Hypothesis".
I'll start by explaining the general
nature of cancer, its multistep process.
The genetic changes, the fact that
it's a somatic evolutionary process.
Examples of some changes.
And I'll also be discussing inherited
susceptibilities to colorectal cancer.
And then I'll proceed with saying
something about multifactorial
inheritance and how one can approach
the problems of investigating
multifactorial inheritance to colorectal
cancer and how this can be used for
other types of multifactorial inherited
susceptibility investigations.
0:42
The incidence of colorectal cancer
increases sharply with age, and
this is a characteristic indeed of nearly
all cancers both in humans and animals.
And it's best explained by the fact that
cancers are multistage processes and
we now understand that those multistages,
the different steps that lead to
a cancer are in fact genetic changes and
changes in gene expression
one after another,
occurring until you get
the disease that we call cancer.
1:17
Cancer is therefore a form of somatic
evolution, it's a clonal evolution.
The first mutation gives an advantage
to a cell with respect to potentially
producing a cancer and
then within the clone produced by that
another mutation arises and so on.
Each subsequent mutation giving a further
advantage to the outcome of the cancer.
And in each case the new mutation
has to occur in a clone that carries
all the previous mutations.
There's no possibility of any sexual
exchange between the different
cells that might have different
numbers of mutations.
And our challenge in understanding cancer
is to find what those changes are.
To find out about their functions and
so why they're selected for
and then to use this information in
dealing with cancer as a disease.